The consignment arrived on a Royal Air Maroc flight from India, which began exporting the vaccine.
World Health Organization Director-General Tedros Adhanom Ghebreyesus this week described the unequal access poor countries had to COVID-19 vaccines as a "catastrophic moral failure".
The two leaders spoke about moving forward with a U.S.-brokered agreement announced earlier this month to normalize bilateral ties, according to the Israeli statement.
Bourita, in the interview, highlighted Morocco's enduring connection to Israel through its domestic Jewish community and the estimated 700,000 Israeli Jews of Moroccan descent.
The largest party in Morocco’s government faced internal wrangling over a move that some Moroccans regard as a betrayal of Palestinians.
The U.S.-brokered deal - the fourth such “normalisation” announcement involving an Arab country and Israel in as many months - also drew criticism from Moscow.